Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatine/peptidylarginine deiminase | Verru16B_RS13110 | Not Available | Positive | 3122538 - 3123581 | 39134.1 |
| hypothetical protein | Verru16B_RS13115 | Not Available | Positive | 3123586 - 3124041 | 16514.7 |
| 30s ribosomal protein s1 | Verru16B_RS13120 | Not Available | Positive | 3124236 - 3125909 | 62101.7 |
| glycoside hydrolase family 27 protein | Verru16B_RS13125 | Not Available | Positive | 3126130 - 3127332 | 45007.5 |
| rna polymerase sigma factor rpod/siga | Verru16B_RS13130 | Not Available | Negative | 3127465 - 3128556 | 40361.7 |
| anthranilate synthase component i | Verru16B_RS13135 | Not Available | Negative | 3128693 - 3130132 | 51592.1 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | Verru16B_RS13140 | Not Available | Negative | 3130136 - 3131986 | 67216.9 |
| glucose-1-phosphate adenylyltransferase | Verru16B_RS13145 | Not Available | Positive | 3132057 - 3133340 | 47102.9 |
| prolipoprotein diacylglyceryl transferase | Verru16B_RS13150 | Not Available | Negative | 3133323 - 3134141 | 29943.9 |
| glycine cleavage system aminomethyltransferase gcvt | Verru16B_RS13155 | Not Available | Positive | 3134267 - 3135364 | 39363.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
