Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | Verru16B_RS13060 | Not Available | Negative | 3112052 - 3112555 | 18846.0 |
| pilus assembly protein pilm | Verru16B_RS13065 | Not Available | Positive | 3112633 - 3114186 | 54817.7 |
| amuc_1100 family pilus-like protein | Verru16B_RS13070 | Not Available | Positive | 3114190 - 3115065 | 31713.1 |
| hypothetical protein | Verru16B_RS13075 | Not Available | Positive | 3115062 - 3115976 | 32924.2 |
| hypothetical protein | Verru16B_RS13080 | Not Available | Positive | 3115983 - 3118154 | 75704.0 |
| hypothetical protein | Verru16B_RS13085 | Not Available | Negative | 3118190 - 3119323 | 38249.3 |
| 5'-3' exonuclease h3th domain-containing protein | Verru16B_RS13090 | Not Available | Positive | 3119527 - 3120411 | 32285.0 |
| hypothetical protein | Verru16B_RS13095 | Not Available | Positive | 3120470 - 3120697 | 8487.34 |
| response regulator transcription factor | Verru16B_RS13100 | Not Available | Negative | 3120791 - 3121525 | 27411.1 |
| carbon-nitrogen hydrolase | Verru16B_RS13105 | Not Available | Positive | 3121659 - 3122534 | 32575.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
