Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation initiator family protein | Verru16B_RS13020 | Not Available | Positive | 3102157 - 3102447 | 11073.6 |
| udpgp type 1 family protein | Verru16B_RS13025 | Not Available | Positive | 3102444 - 3103868 | 51084.8 |
| phospho-sugar mutase | Verru16B_RS13030 | Not Available | Positive | 3103973 - 3105922 | 70367.8 |
| nucleoside hydrolase | Verru16B_RS13035 | Not Available | Positive | 3105988 - 3107073 | 39272.4 |
| hypothetical protein | Verru16B_RS13040 | Not Available | Negative | 3107079 - 3107942 | 30786.3 |
| hypothetical protein | Verru16B_RS18355 | Not Available | Negative | 3108041 - 3108190 | 5436.76 |
| dihydrolipoamide acetyltransferase family protein | Verru16B_RS13045 | Not Available | Negative | 3108329 - 3109291 | 33106.4 |
| biotin/lipoyl-containing protein | Verru16B_RS18950 | Not Available | Negative | 3109270 - 3109674 | 14795.4 |
| alpha-ketoacid dehydrogenase subunit beta | Verru16B_RS13050 | Not Available | Negative | 3109819 - 3110796 | 35236.8 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | Verru16B_RS13055 | Not Available | Negative | 3110850 - 3111941 | 40166.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
