Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2306 domain-containing protein | Verru16B_RS12970 | Not Available | Negative | 3091319 - 3091930 | 22402.9 |
| pas domain-containing sensor histidine kinase | Verru16B_RS12975 | Not Available | Negative | 3091986 - 3093332 | 49117.7 |
| sigma-54 dependent transcriptional regulator | Verru16B_RS12980 | Not Available | Negative | 3093434 - 3094801 | 49966.2 |
| hypothetical protein | Verru16B_RS12985 | Not Available | Negative | 3094886 - 3095140 | 8447.65 |
| abc transporter permease | Verru16B_RS12990 | Not Available | Negative | 3095358 - 3096566 | 43179.6 |
| abc transporter atp-binding protein | Verru16B_RS12995 | Not Available | Negative | 3096669 - 3097430 | 27550.4 |
| efflux rnd transporter periplasmic adaptor subunit | Verru16B_RS19065 | Not Available | Negative | 3097436 - 3098908 | 51625.5 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | Verru16B_RS13005 | Not Available | Positive | 3099037 - 3100458 | 53487.1 |
| hypothetical protein | Verru16B_RS13010 | Not Available | Negative | 3100546 - 3101223 | 23254.2 |
| exea family protein | Verru16B_RS13015 | Not Available | Negative | 3101225 - 3102040 | 31554.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
