Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| folylpolyglutamate synthase/dihydrofolate synthase family protein | Verru16B_RS12920 | Not Available | Positive | 3072355 - 3073728 | 49344.2 |
| hypothetical protein | Verru16B_RS12925 | Not Available | Negative | 3073864 - 3074622 | 27026.3 |
| mdta/muxa family multidrug efflux rnd transporter periplasmic adaptor subunit | Verru16B_RS12930 | Not Available | Positive | 3074876 - 3076132 | 46017.6 |
| multidrug efflux rnd transporter permease subunit | Verru16B_RS12935 | Not Available | Positive | 3076129 - 3079236 | 111111.0 |
| efflux rnd transporter permease subunit | Verru16B_RS12940 | Not Available | Positive | 3079316 - 3082423 | 111325.0 |
| adop family duplicated permease | Verru16B_RS12945 | Not Available | Negative | 3082446 - 3084986 | 90217.7 |
| tetratricopeptide repeat protein | Verru16B_RS12950 | Not Available | Negative | 3085074 - 3086339 | 44420.5 |
| abc transporter permease | Verru16B_RS12955 | Not Available | Negative | 3086423 - 3088831 | 87087.0 |
| abc transporter atp-binding protein | Verru16B_RS12960 | Not Available | Negative | 3088926 - 3089636 | 25712.8 |
| efflux rnd transporter periplasmic adaptor subunit | Verru16B_RS12965 | Not Available | Negative | 3089881 - 3091158 | 45644.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
