Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal protein n' | Verru16B_RS12870 | Not Available | Positive | 3059850 - 3062081 | 83341.5 |
| udp-n-acetylmuramate--l-alanine ligase | Verru16B_RS12875 | Not Available | Positive | 3062164 - 3063594 | 51532.7 |
| atp-binding protein | Verru16B_RS12880 | Not Available | Negative | 3063684 - 3065708 | 73280.0 |
| 30s ribosomal protein s12 methylthiotransferase rimo | Verru16B_RS12885 | Not Available | Negative | 3065831 - 3067255 | 53453.2 |
| rhodanese-like domain-containing protein | Verru16B_RS12890 | Not Available | Negative | 3067620 - 3067940 | 11329.7 |
| mannose-1-phosphate guanylyltransferase | Verru16B_RS12895 | Not Available | Positive | 3068038 - 3069126 | 38418.4 |
| holliday junction resolvase ruvx | Verru16B_RS12900 | Not Available | Positive | 3069246 - 3069671 | 15581.7 |
| trna pseudouridine(38-40) synthase trua | Verru16B_RS12905 | Not Available | Positive | 3069747 - 3070499 | 28348.1 |
| comf family protein | Verru16B_RS12910 | Not Available | Positive | 3070583 - 3071308 | 26410.9 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | Verru16B_RS12915 | Not Available | Positive | 3071320 - 3072237 | 32593.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
