Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin family protein | Verru16B_RS01275 | Not Available | Positive | 285879 - 286142 | 9558.25 |
| thioesterase family protein | Verru16B_RS01280 | Not Available | Positive | 286195 - 286626 | 16272.4 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | Verru16B_RS01285 | Not Available | Positive | 286680 - 287774 | 39498.1 |
| hypothetical protein | Verru16B_RS01290 | Not Available | Negative | 287874 - 288296 | 15814.6 |
| hypothetical protein | Verru16B_RS01295 | Not Available | Negative | 288642 - 288857 | 8184.26 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | Verru16B_RS01300 | Not Available | Positive | 288984 - 289571 | 21508.8 |
| hypothetical protein | Verru16B_RS01305 | Not Available | Negative | 290193 - 291062 | 32090.4 |
| sensor histidine kinase | Verru16B_RS01310 | Not Available | Positive | 291177 - 292457 | 45877.3 |
| dna-binding transcriptional regulator | Verru16B_RS01315 | Not Available | Positive | 292534 - 293697 | 43374.3 |
| sugar phosphate isomerase/epimerase | Verru16B_RS01320 | Not Available | Positive | 293711 - 294532 | 30371.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
