Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS12820 | Not Available | Positive | 3053044 - 3053400 | 12476.7 |
| hypothetical protein | Verru16B_RS12825 | Not Available | Positive | 3053414 - 3054097 | 25122.7 |
| hypothetical protein | Verru16B_RS12830 | Not Available | Positive | 3054144 - 3054818 | 24390.2 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | Verru16B_RS12835 | Not Available | Positive | 3054815 - 3055708 | 30863.2 |
| thioredoxin | Verru16B_RS12840 | Not Available | Negative | 3055817 - 3056140 | 11337.8 |
| hypothetical protein | Verru16B_RS12845 | Not Available | Negative | 3056234 - 3056488 | 9485.5 |
| scpa family protein | Verru16B_RS12850 | Not Available | Negative | 3056463 - 3057272 | 30584.1 |
| tetratricopeptide repeat protein | Verru16B_RS12855 | Not Available | Negative | 3057425 - 3058783 | 49692.2 |
| tpr end-of-group domain-containing protein | Verru16B_RS12860 | Not Available | Negative | 3058852 - 3059226 | 13989.9 |
| fur family transcriptional regulator | Verru16B_RS12865 | Not Available | Negative | 3059255 - 3059725 | 17386.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
