Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | Verru16B_RS12720 | Not Available | Positive | 3036612 - 3037214 | 22327.9 |
| phosphatidylglycerophosphatase a | Verru16B_RS12725 | Not Available | Positive | 3037278 - 3037793 | 18478.9 |
| hypothetical protein | Verru16B_RS12730 | Not Available | Negative | 3037947 - 3038858 | 33674.1 |
| transcription termination/antitermination protein nusg | Verru16B_RS12735 | Not Available | Negative | 3038862 - 3039374 | 19260.6 |
| type ii 3-dehydroquinate dehydratase | Verru16B_RS12740 | Not Available | Negative | 3039379 - 3039813 | 15689.2 |
| nif3-like dinuclear metal center hexameric protein | Verru16B_RS12745 | Not Available | Negative | 3039902 - 3040654 | 27528.1 |
| cytidine/deoxycytidylate deaminase family protein | Verru16B_RS12750 | Not Available | Positive | 3040771 - 3041253 | 17410.7 |
| yqge/algh family protein | Verru16B_RS12755 | Not Available | Positive | 3041270 - 3041833 | 20482.5 |
| type b 50s ribosomal protein l36 | Verru16B_RS12760 | Not Available | Positive | 3041943 - 3042068 | 4724.0 |
| type b 50s ribosomal protein l31 | Verru16B_RS12765 | Not Available | Positive | 3042088 - 3042342 | 9471.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
