Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | Verru16B_RS12675 | Not Available | Negative | 3030302 - 3031417 | 41199.1 |
| deda family protein | Verru16B_RS12680 | Not Available | Negative | 3031517 - 3032185 | 25139.3 |
| small basic protein | Verru16B_RS17925 | Not Available | Negative | 3032249 - 3032407 | 5854.29 |
| divalent-cation tolerance protein cuta | Verru16B_RS12685 | Not Available | Negative | 3032422 - 3032760 | 12646.8 |
| dna-directed rna polymerase subunit omega | Verru16B_RS12690 | Not Available | Positive | 3032927 - 3033127 | 7644.25 |
| ssra-binding protein smpb | Verru16B_RS12695 | Not Available | Positive | 3033280 - 3033753 | 18323.1 |
| homoserine kinase | Verru16B_RS12700 | Not Available | Positive | 3033750 - 3034688 | 32716.6 |
| response regulator | Verru16B_RS12705 | Not Available | Negative | 3034813 - 3035253 | 16126.7 |
| trna (cytidine(34)-2'-o)-methyltransferase | Verru16B_RS12710 | Not Available | Positive | 3035338 - 3035817 | 17538.8 |
| pantetheine-phosphate adenylyltransferase | Verru16B_RS12715 | Not Available | Negative | 3035954 - 3036433 | 17641.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
