Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS12575 | Not Available | Positive | 3011434 - 3011898 | 17867.5 |
| m48 family metallopeptidase | Verru16B_RS12580 | Not Available | Positive | 3012069 - 3012587 | 19513.4 |
| nuclease-related domain-containing protein | Verru16B_RS12585 | Not Available | Positive | 3012760 - 3013659 | 34207.5 |
| hypothetical protein | Verru16B_RS12590 | Not Available | Positive | 3013810 - 3014025 | 7999.6 |
| type ii toxin-antitoxin system rele/pare family toxin | Verru16B_RS12595 | Not Available | Positive | 3014037 - 3014321 | 10734.9 |
| pin domain-containing protein | Verru16B_RS12600 | Not Available | Positive | 3014460 - 3015119 | 24184.6 |
| voc family protein | Verru16B_RS12605 | Not Available | Positive | 3015243 - 3015725 | 17450.1 |
| duf1294 domain-containing protein | Verru16B_RS12610 | Not Available | Positive | 3016031 - 3016450 | 15650.4 |
| hypothetical protein | Verru16B_RS12615 | Not Available | Positive | 3016654 - 3017346 | 26323.5 |
| glycoside hydrolase family 5 protein | Verru16B_RS12620 | Not Available | Positive | 3017986 - 3019191 | 45260.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
