Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redoxin domain-containing protein | Verru16B_RS12485 | Not Available | Positive | 2988737 - 2989354 | 21617.4 |
| pfkb family carbohydrate kinase | Verru16B_RS12490 | Not Available | Negative | 2989498 - 2990397 | 31723.9 |
| hypothetical protein | Verru16B_RS12495 | Not Available | Negative | 2990457 - 2990942 | 18151.0 |
| gmc oxidoreductase | Verru16B_RS12500 | Not Available | Positive | 2991289 - 2993103 | 66176.0 |
| hypothetical protein | Verru16B_RS18685 | Not Available | Positive | 2993157 - 2993348 | 6680.0 |
| gluconate 2-dehydrogenase subunit 3 family protein | Verru16B_RS12505 | Not Available | Positive | 2993345 - 2993797 | 16316.2 |
| sugar phosphate isomerase/epimerase | Verru16B_RS12510 | Not Available | Positive | 2993910 - 2994767 | 30832.1 |
| sugar mfs transporter | Verru16B_RS12515 | Not Available | Positive | 2994989 - 2996209 | 42627.2 |
| sugar phosphate isomerase/epimerase | Verru16B_RS12520 | Not Available | Positive | 2996418 - 2997455 | 38384.2 |
| gfo/idh/moca family protein | Verru16B_RS12525 | Not Available | Positive | 2997637 - 2998719 | 38483.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
