Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nadp(+)) | Verru16B_RS12435 | Not Available | Positive | 2976868 - 2978457 | 54911.1 |
| gfo/idh/moca family oxidoreductase | Verru16B_RS17915 | Not Available | Positive | 2978525 - 2980459 | 69783.1 |
| sdr family oxidoreductase | Verru16B_RS12445 | Not Available | Positive | 2980554 - 2981255 | 24674.7 |
| duf3016 domain-containing protein | Verru16B_RS12450 | Not Available | Negative | 2981388 - 2981894 | 19040.9 |
| d-aminoacyl-trna deacylase | Verru16B_RS12455 | Not Available | Negative | 2981958 - 2982458 | 17633.4 |
| enoyl-acp reductase fabv | Verru16B_RS12460 | Not Available | Negative | 2982553 - 2983740 | 42641.2 |
| anti-sigma factor | Verru16B_RS12465 | Not Available | Negative | 2983836 - 2984684 | 30195.4 |
| sigma-70 family rna polymerase sigma factor | Verru16B_RS12470 | Not Available | Negative | 2984681 - 2985277 | 21590.8 |
| exosortase/archaeosortase family protein | Verru16B_RS12475 | Not Available | Negative | 2985531 - 2987147 | 58646.4 |
| lipopolysaccharide assembly protein lapb | Verru16B_RS12480 | Not Available | Negative | 2987144 - 2988634 | 55976.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
