Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS12285 | Not Available | Negative | 2941259 - 2941939 | 24815.7 |
| trigger factor | Verru16B_RS12290 | Not Available | Positive | 2942082 - 2943404 | 48649.0 |
| atp-dependent clp protease proteolytic subunit | Verru16B_RS12295 | Not Available | Positive | 2943401 - 2944018 | 22468.1 |
| atp-dependent clp protease atp-binding subunit clpx | Verru16B_RS12300 | Not Available | Positive | 2944096 - 2945400 | 47614.0 |
| m20/m25/m40 family metallo-hydrolase | Verru16B_RS12305 | Not Available | Negative | 2945531 - 2946598 | 38200.0 |
| opt/ysl family transporter | Verru16B_RS12310 | Not Available | Negative | 2946642 - 2948429 | 62585.3 |
| alpha/beta fold hydrolase | Verru16B_RS12315 | Not Available | Negative | 2948528 - 2949295 | 27968.1 |
| ribulose-phosphate 3-epimerase | Verru16B_RS12320 | Not Available | Negative | 2949361 - 2950023 | 23535.6 |
| lps assembly lipoprotein lpte | Verru16B_RS12325 | Not Available | Negative | 2950178 - 2950699 | 18544.3 |
| tetratricopeptide repeat protein | Verru16B_RS12330 | Not Available | Negative | 2950763 - 2951827 | 39518.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
