Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipid acyltransferase family protein | Verru16B_RS12235 | Not Available | Negative | 2920683 - 2921594 | 34486.8 |
| glycosyltransferase family 9 protein | Verru16B_RS12240 | Not Available | Positive | 2921857 - 2922843 | 36924.2 |
| hypothetical protein | Verru16B_RS12245 | Not Available | Negative | 2922854 - 2923264 | 15422.5 |
| hypothetical protein | Verru16B_RS12250 | Not Available | Negative | 2923261 - 2924073 | 30059.5 |
| serine--trna ligase | Verru16B_RS12255 | Not Available | Positive | 2924186 - 2925454 | 46580.7 |
| trna lysidine(34) synthetase tils | Verru16B_RS12260 | Not Available | Positive | 2925451 - 2926443 | 36476.2 |
| atp-dependent zinc metalloprotease ftsh | Verru16B_RS12265 | Not Available | Positive | 2926531 - 2928546 | 72966.1 |
| udp-glucose 6-dehydrogenase | Verru16B_RS12270 | Not Available | Positive | 2928610 - 2929971 | 48670.6 |
| autotransporter-associated beta strand repeat-containing protein | Verru16B_RS19140 | Not Available | Negative | 2930093 - 2939857 | 318807.0 |
| alanine racemase | Verru16B_RS12280 | Not Available | Negative | 2940111 - 2941262 | 41241.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
