Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | Verru16B_RS12185 | Not Available | Positive | 2908079 - 2909620 | 58280.6 |
| isochorismate synthase menf | Verru16B_RS12190 | Not Available | Positive | 2909617 - 2911041 | 49938.5 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | Verru16B_RS12195 | Not Available | Positive | 2911038 - 2912780 | 62324.0 |
| atp-binding protein | Verru16B_RS12200 | Not Available | Negative | 2912801 - 2913895 | 40163.8 |
| potassium transporter kup | Verru16B_RS12205 | Not Available | Negative | 2914050 - 2915945 | 67820.6 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | Verru16B_RS12210 | Not Available | Positive | 2916088 - 2916921 | 30181.4 |
| yqjf family protein | Verru16B_RS12215 | Not Available | Positive | 2916909 - 2917652 | 27750.3 |
| anti-sigma factor | Verru16B_RS12220 | Not Available | Negative | 2917653 - 2918168 | 18156.3 |
| hypothetical protein | Verru16B_RS12225 | Not Available | Negative | 2918265 - 2918684 | 16296.1 |
| abc transporter atp-binding protein | Verru16B_RS18890 | Not Available | Negative | 2918899 - 2920617 | 62268.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
