Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | Verru16B_RS12085 | Not Available | Negative | 2882709 - 2883095 | 14120.2 |
| paai family thioesterase | Verru16B_RS12090 | Not Available | Negative | 2883160 - 2883633 | 16822.2 |
| para family protein | Verru16B_RS12095 | Not Available | Positive | 2883747 - 2884646 | 33088.2 |
| hypothetical protein | Verru16B_RS12100 | Not Available | Positive | 2884668 - 2885633 | 34994.7 |
| hypothetical protein | Verru16B_RS12105 | Not Available | Positive | 2885781 - 2886416 | 23355.0 |
| hypothetical protein | Verru16B_RS12110 | Not Available | Positive | 2886480 - 2887781 | 45917.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | Verru16B_RS12115 | Not Available | Negative | 2887771 - 2889492 | 62867.1 |
| abc transporter permease | Verru16B_RS12120 | Not Available | Positive | 2889646 - 2892141 | 89366.6 |
| dna alkylation repair protein | Verru16B_RS12125 | Not Available | Negative | 2892216 - 2893313 | 41194.7 |
| alanine--trna ligase | Verru16B_RS12130 | Not Available | Negative | 2893350 - 2896067 | 97780.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
