Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | Verru16B_RS11890 | Not Available | Positive | 2838914 - 2840827 | 71473.4 |
| air synthase related protein | Verru16B_RS11895 | Not Available | Positive | 2840905 - 2842011 | 39297.9 |
| dead/deah box helicase | Verru16B_RS11900 | Not Available | Negative | 2842121 - 2843572 | 51776.5 |
| apc family permease | Verru16B_RS11905 | Not Available | Negative | 2843582 - 2845591 | 71874.2 |
| dead/deah box helicase | Verru16B_RS11910 | Not Available | Positive | 2846029 - 2847831 | 66393.1 |
| cupin domain-containing protein | Verru16B_RS11915 | Not Available | Positive | 2848016 - 2848522 | 18075.6 |
| hnh endonuclease | Verru16B_RS11920 | Not Available | Positive | 2848602 - 2849219 | 24351.4 |
| act domain-containing protein | Verru16B_RS11925 | Not Available | Positive | 2849386 - 2849946 | 18920.0 |
| gaf domain-containing protein | Verru16B_RS11930 | Not Available | Negative | 2850154 - 2851860 | 61312.4 |
| [protein-pii] uridylyltransferase | Verru16B_RS11935 | Not Available | Negative | 2851997 - 2854795 | 104715.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
