Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shoct domain-containing protein | Verru16B_RS11840 | Not Available | Negative | 2827742 - 2828236 | 17877.6 |
| hypothetical protein | Verru16B_RS11845 | Not Available | Positive | 2828334 - 2828570 | 8805.74 |
| m1 family metallopeptidase | Verru16B_RS11850 | Not Available | Positive | 2828616 - 2830343 | 64205.6 |
| mate family efflux transporter | Verru16B_RS11855 | Not Available | Negative | 2830354 - 2831784 | 50430.4 |
| gntp family permease | Verru16B_RS11860 | Not Available | Negative | 2831848 - 2833194 | 45333.7 |
| thivi_2564 family membrane protein | Verru16B_RS11865 | Not Available | Positive | 2833327 - 2833524 | 7034.19 |
| pled family two-component system response regulator | Verru16B_RS11870 | Not Available | Negative | 2833559 - 2833945 | 14083.6 |
| hypothetical protein | Verru16B_RS11875 | Not Available | Negative | 2834069 - 2834281 | 7685.37 |
| hypothetical protein | Verru16B_RS11880 | Not Available | Negative | 2834341 - 2834550 | 7448.93 |
| phosphoribosylformylglycinamidine synthase | Verru16B_RS11885 | Not Available | Negative | 2834599 - 2838582 | 142169.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
