Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ring-cleaving dioxygenase | Verru16B_RS11635 | Not Available | Negative | 2786272 - 2787207 | 34013.2 |
| marr family winged helix-turn-helix transcriptional regulator | Verru16B_RS11640 | Not Available | Negative | 2787249 - 2787692 | 16110.7 |
| ribose 5-phosphate isomerase b | Verru16B_RS11645 | Not Available | Negative | 2787870 - 2788307 | 15843.9 |
| hypothetical protein | Verru16B_RS11650 | Not Available | Positive | 2788385 - 2788822 | 15738.8 |
| had family hydrolase | Verru16B_RS11655 | Not Available | Negative | 2788914 - 2789600 | 25087.8 |
| sumf1/egtb/pvdo family nonheme iron enzyme | Verru16B_RS11660 | Not Available | Positive | 2789723 - 2791855 | 77460.3 |
| dmt family transporter | Verru16B_RS11665 | Not Available | Negative | 2791897 - 2792781 | 30916.6 |
| dihydrolipoyl dehydrogenase | Verru16B_RS11670 | Not Available | Negative | 2792831 - 2794204 | 47559.9 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | Verru16B_RS11675 | Not Available | Negative | 2794315 - 2795556 | 43224.3 |
| 2-oxoglutarate dehydrogenase e1 component | Verru16B_RS11680 | Not Available | Negative | 2795667 - 2798438 | 102604.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
