Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic nucleotide-binding domain-containing protein | Verru16B_RS01120 | Not Available | Negative | 243989 - 244444 | 16641.1 |
| paqr family membrane homeostasis protein trha | Verru16B_RS01125 | Not Available | Negative | 244632 - 245270 | 23138.8 |
| tetratricopeptide repeat protein | Verru16B_RS01130 | Not Available | Negative | 245324 - 247435 | 75459.9 |
| tonb-dependent receptor | Verru16B_RS01135 | Not Available | Positive | 247713 - 250976 | 117883.0 |
| ribonucleotide-diphosphate reductase subunit beta | Verru16B_RS01140 | Not Available | Positive | 252327 - 253412 | 41773.2 |
| ribonucleoside-diphosphate reductase subunit alpha | Verru16B_RS01145 | Not Available | Positive | 253633 - 257052 | 127842.0 |
| nacht domain-containing ntpase | Verru16B_RS17695 | Not Available | Negative | 257308 - 260229 | 110390.0 |
| hypothetical protein | Verru16B_RS01155 | Not Available | Positive | 260865 - 261521 | 23725.1 |
| m20/m25/m40 family metallo-hydrolase | Verru16B_RS01165 | Not Available | Negative | 261926 - 263548 | 59936.3 |
| duf3500 domain-containing protein | Verru16B_RS01170 | Not Available | Positive | 263738 - 264934 | 43741.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
