Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS11340 | Not Available | Negative | 2726231 - 2726797 | 19084.8 |
| ipt/tig domain-containing protein | Verru16B_RS11345 | Not Available | Negative | 2726865 - 2727773 | 32156.6 |
| radical sam family heme chaperone hemw | Verru16B_RS11350 | Not Available | Positive | 2727837 - 2729066 | 44773.4 |
| hypothetical protein | Verru16B_RS11355 | Not Available | Positive | 2729123 - 2729578 | 16264.8 |
| m23 family metallopeptidase | Verru16B_RS11360 | Not Available | Positive | 2729656 - 2730687 | 37766.4 |
| pitrilysin family protein | Verru16B_RS18880 | Not Available | Negative | 2730814 - 2732469 | 59520.0 |
| pitrilysin family protein | Verru16B_RS18885 | Not Available | Negative | 2732466 - 2733659 | 43616.7 |
| deoxyhypusine synthase family protein | Verru16B_RS11370 | Not Available | Positive | 2733860 - 2734909 | 38779.7 |
| 3-deoxy-d-manno-octulosonic acid transferase | Verru16B_RS11375 | Not Available | Positive | 2734998 - 2736296 | 48105.7 |
| mgdg synthase family glycosyltransferase | Verru16B_RS11380 | Not Available | Negative | 2736346 - 2737530 | 43337.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
