Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | Verru16B_RS11290 | Not Available | Positive | 2713906 - 2714205 | 10979.4 |
| duf3500 domain-containing protein | Verru16B_RS11295 | Not Available | Negative | 2714215 - 2715243 | 38123.2 |
| pig-l deacetylase family protein | Verru16B_RS11300 | Not Available | Positive | 2715333 - 2716664 | 48995.1 |
| cation:proton antiporter | Verru16B_RS11305 | Not Available | Positive | 2716729 - 2719008 | 80951.3 |
| twin-arginine translocase tata/tate family subunit | Verru16B_RS11310 | Not Available | Negative | 2719161 - 2719376 | 7415.33 |
| rna polymerase sigma factor rpod | Verru16B_RS19200 | Not Available | Negative | 2719430 - 2721373 | 73785.9 |
| dna primase | Verru16B_RS11320 | Not Available | Negative | 2721429 - 2723285 | 68567.4 |
| duf362 domain-containing protein | Verru16B_RS11325 | Not Available | Positive | 2723445 - 2724485 | 37503.9 |
| ph domain-containing protein | Verru16B_RS11330 | Not Available | Negative | 2724601 - 2725581 | 35918.3 |
| ph domain-containing protein | Verru16B_RS11335 | Not Available | Negative | 2725587 - 2726117 | 20071.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
