Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | Verru16B_RS11240 | Not Available | Positive | 2697391 - 2698569 | 43420.1 |
| polysaccharide biosynthesis tyrosine autokinase | Verru16B_RS11245 | Not Available | Positive | 2698589 - 2700763 | 80304.9 |
| valine--trna ligase | Verru16B_RS11250 | Not Available | Positive | 2700999 - 2703722 | 101743.0 |
| gdp-mannose 4,6-dehydratase | Verru16B_RS11255 | Not Available | Positive | 2703771 - 2704787 | 38813.6 |
| gdp-l-fucose synthase | Verru16B_RS11260 | Not Available | Positive | 2704885 - 2705820 | 33688.7 |
| duf4870 domain-containing protein | Verru16B_RS11265 | Not Available | Positive | 2705909 - 2706262 | 12603.9 |
| peptide chain release factor 2 | Verru16B_RS11270 | Not Available | Positive | 2706325 - 2707468 | 42784.7 |
| hypothetical protein | Verru16B_RS11275 | Not Available | Positive | 2707564 - 2708982 | 52352.3 |
| lysm peptidoglycan-binding domain-containing protein | Verru16B_RS11280 | Not Available | Positive | 2709031 - 2713137 | 146424.0 |
| hypothetical protein | Verru16B_RS11285 | Not Available | Negative | 2713230 - 2713487 | 9776.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
