Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | Verru16B_RS11190 | Not Available | Negative | 2688132 - 2688947 | 30597.1 |
| sulfite reductase subunit alpha | Verru16B_RS11195 | Not Available | Positive | 2688922 - 2690181 | 46514.8 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | Verru16B_RS11200 | Not Available | Positive | 2690346 - 2691092 | 25543.9 |
| acyl carrier protein | Verru16B_RS11205 | Not Available | Positive | 2691132 - 2691395 | 9756.38 |
| beta-ketoacyl-acp synthase ii | Verru16B_RS11210 | Not Available | Positive | 2691481 - 2692731 | 44242.1 |
| Trna-phe | Not Available | Not Available | Positive | 2692822 - 2692897 | Not Available |
| hypothetical protein | Verru16B_RS11220 | Not Available | Negative | 2693115 - 2693459 | 11738.5 |
| hypothetical protein | Verru16B_RS11225 | Not Available | Negative | 2693526 - 2693930 | 14753.3 |
| sigma-54 dependent transcriptional regulator | Verru16B_RS11230 | Not Available | Positive | 2694076 - 2695449 | 51166.0 |
| hypothetical protein | Verru16B_RS11235 | Not Available | Positive | 2695562 - 2697331 | 64881.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
