Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | Verru16B_RS11090 | Not Available | Positive | 2663391 - 2663678 | 10680.7 |
| aaa family atpase | Verru16B_RS11095 | Not Available | Negative | 2663791 - 2664519 | 26810.4 |
| 50s ribosomal protein l28 | Verru16B_RS11100 | Not Available | Negative | 2664980 - 2665210 | 8348.64 |
| sam-dependent methyltransferase | Verru16B_RS11105 | Not Available | Negative | 2665296 - 2666282 | 37239.6 |
| s41 family peptidase | Verru16B_RS11110 | Not Available | Positive | 2666368 - 2667627 | 45711.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | Verru16B_RS11115 | Not Available | Positive | 2667743 - 2668780 | 36338.7 |
| sugar phosphate isomerase/epimerase | Verru16B_RS11120 | Not Available | Negative | 2668855 - 2669688 | 30041.1 |
| excinuclease abc subunit uvra | Verru16B_RS11125 | Not Available | Negative | 2669730 - 2675717 | 218270.0 |
| glycosyltransferase | Verru16B_RS11130 | Not Available | Negative | 2675902 - 2676987 | 40238.0 |
| phage holin family protein | Verru16B_RS11135 | Not Available | Positive | 2677029 - 2677439 | 14483.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
