Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase family glycosyl hydrolase | Verru16B_RS11040 | Not Available | Positive | 2652065 - 2654539 | 92359.4 |
| type i glyceraldehyde-3-phosphate dehydrogenase | Verru16B_RS11045 | Not Available | Positive | 2654769 - 2655815 | 37100.7 |
| phosphoglycerate kinase | Verru16B_RS11050 | Not Available | Positive | 2655942 - 2657216 | 44137.8 |
| triose-phosphate isomerase | Verru16B_RS11055 | Not Available | Positive | 2657322 - 2658089 | 26898.8 |
| hypothetical protein | Verru16B_RS11060 | Not Available | Positive | 2658166 - 2659149 | 36778.5 |
| hypothetical protein | Verru16B_RS11065 | Not Available | Negative | 2659250 - 2659723 | 17386.1 |
| polyprenyl synthetase family protein | Verru16B_RS11070 | Not Available | Negative | 2659727 - 2660650 | 32359.8 |
| fmdb family zinc ribbon protein | Verru16B_RS11075 | Not Available | Positive | 2660768 - 2661028 | 9141.13 |
| hypothetical protein | Verru16B_RS11080 | Not Available | Positive | 2661041 - 2661724 | 24152.4 |
| murein biosynthesis integral membrane protein murj | Verru16B_RS11085 | Not Available | Positive | 2661802 - 2663391 | 56156.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
