Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | Verru16B_RS10990 | Not Available | Negative | 2637302 - 2640964 | 135531.0 |
| energy transducer tonb | Verru16B_RS10995 | Not Available | Positive | 2641090 - 2641437 | 12607.6 |
| methyl-accepting chemotaxis protein | Verru16B_RS19135 | Not Available | Positive | 2641467 - 2643419 | 67425.9 |
| lyse family transporter | Verru16B_RS11005 | Not Available | Positive | 2643502 - 2644134 | 22387.5 |
| gluconate 2-dehydrogenase subunit 3 family protein | Verru16B_RS11010 | Not Available | Negative | 2644238 - 2644786 | 19262.2 |
| fad-dependent oxidoreductase | Verru16B_RS11015 | Not Available | Negative | 2644828 - 2646510 | 62053.3 |
| voc family protein | Verru16B_RS11020 | Not Available | Negative | 2646879 - 2647283 | 14585.3 |
| n-acetyltransferase | Verru16B_RS11025 | Not Available | Negative | 2647528 - 2648046 | 19460.3 |
| response regulator | Verru16B_RS11030 | Not Available | Negative | 2648133 - 2650406 | 82130.1 |
| trna 2-thiouridine(34) synthase mnma | Verru16B_RS11035 | Not Available | Negative | 2650612 - 2651751 | 41445.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
