Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide exchange factor grpe | Verru16B_RS10545 | Not Available | Positive | 2547249 - 2547830 | 20702.4 |
| molecular chaperone dnaj | Verru16B_RS10550 | Not Available | Positive | 2547833 - 2549002 | 41295.8 |
| duf2937 family protein | Verru16B_RS10555 | Not Available | Negative | 2549009 - 2549551 | 19592.0 |
| phosphoribosylglycinamide formyltransferase | Verru16B_RS10560 | Not Available | Positive | 2549658 - 2550236 | 19962.5 |
| 50s ribosomal protein l11 methyltransferase | Verru16B_RS10565 | Not Available | Positive | 2550239 - 2551111 | 31385.8 |
| 3-isopropylmalate dehydrogenase | Verru16B_RS10570 | Not Available | Negative | 2551115 - 2552475 | 49063.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | Verru16B_RS10575 | Not Available | Negative | 2552532 - 2553017 | 17482.0 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2554134 - 2555693 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2555827 - 2555902 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2555951 - 2556027 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
