Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | Verru16B_RS10495 | Not Available | Positive | 2536484 - 2537821 | 47894.1 |
| twin-arginine translocase tata/tate family subunit | Verru16B_RS18670 | Not Available | Negative | 2537834 - 2538142 | 10765.3 |
| aldose epimerase | Verru16B_RS10505 | Not Available | Negative | 2538177 - 2539097 | 34470.8 |
| nodulation protein nfed | Verru16B_RS10510 | Not Available | Positive | 2539270 - 2540658 | 48921.2 |
| nfed family protein | Verru16B_RS10515 | Not Available | Positive | 2540655 - 2541122 | 16064.3 |
| flotillin-like protein floa | Verru16B_RS10520 | Not Available | Positive | 2541135 - 2542139 | 35424.0 |
| hypothetical protein | Verru16B_RS10525 | Not Available | Positive | 2542191 - 2542760 | 21417.7 |
| helix-turn-helix domain-containing protein | Verru16B_RS10530 | Not Available | Negative | 2542806 - 2543543 | 26720.2 |
| dna translocase ftsk | Verru16B_RS10535 | Not Available | Negative | 2543627 - 2546164 | 91592.3 |
| type i phosphomannose isomerase catalytic subunit | Verru16B_RS10540 | Not Available | Positive | 2546259 - 2547227 | 34835.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
