Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | Verru16B_RS10445 | Not Available | Negative | 2529568 - 2530494 | 33944.0 |
| hypothetical protein | Verru16B_RS10450 | Not Available | Positive | 2530613 - 2530804 | 6323.74 |
| rna polymerase sigma factor | Verru16B_RS10455 | Not Available | Positive | 2530958 - 2531473 | 19787.4 |
| hypothetical protein | Verru16B_RS10460 | Not Available | Positive | 2531433 - 2531996 | 20764.7 |
| s1c family serine protease | Verru16B_RS10465 | Not Available | Positive | 2532009 - 2533082 | 37795.8 |
| duf4199 domain-containing protein | Verru16B_RS10470 | Not Available | Negative | 2533158 - 2533673 | 18523.2 |
| 3-isopropylmalate dehydrogenase | Verru16B_RS10475 | Not Available | Negative | 2533749 - 2534548 | 27966.0 |
| smr/muts family protein | Verru16B_RS10480 | Not Available | Negative | 2534593 - 2534889 | 10626.6 |
| hypothetical protein | Verru16B_RS10485 | Not Available | Negative | 2534994 - 2535293 | 10634.0 |
| abc transporter atp-binding protein | Verru16B_RS10490 | Not Available | Positive | 2535556 - 2536473 | 33608.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
