Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase c-terminal domain-containing protein | Verru16B_RS01020 | Not Available | Negative | 221941 - 224364 | 88411.9 |
| duf1428 domain-containing protein | Verru16B_RS01025 | Not Available | Positive | 224487 - 224852 | 13742.0 |
| endonuclease/exonuclease/phosphatase family protein | Verru16B_RS01030 | Not Available | Positive | 224849 - 225685 | 30933.8 |
| voc family protein | Verru16B_RS01035 | Not Available | Negative | 225700 - 226098 | 14475.3 |
| dabb family protein | Verru16B_RS01040 | Not Available | Positive | 226259 - 226630 | 13294.9 |
| tonb-dependent siderophore receptor | Verru16B_RS01045 | Not Available | Positive | 226845 - 228887 | 74260.7 |
| glycoside hydrolase family 43 protein | Verru16B_RS01050 | Not Available | Positive | 229094 - 230056 | 35950.0 |
| hypothetical protein | Verru16B_RS01055 | Not Available | Positive | 230150 - 230626 | 17241.8 |
| alpha/beta hydrolase | Verru16B_RS01060 | Not Available | Negative | 230733 - 231638 | 31930.4 |
| pqq-binding-like beta-propeller repeat protein | Verru16B_RS01065 | Not Available | Negative | 231645 - 233765 | 76075.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
