Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | Verru16B_RS10245 | Not Available | Positive | 2481115 - 2482155 | 36898.1 |
| methionyl-trna formyltransferase | Verru16B_RS10250 | Not Available | Positive | 2482181 - 2483122 | 34899.1 |
| cupin domain-containing protein | Verru16B_RS10255 | Not Available | Positive | 2483177 - 2483623 | 16905.1 |
| class i sam-dependent methyltransferase | Verru16B_RS10260 | Not Available | Positive | 2483620 - 2484867 | 46014.2 |
| pig-l deacetylase family protein | Verru16B_RS10265 | Not Available | Positive | 2484873 - 2485544 | 24678.9 |
| hypothetical protein | Verru16B_RS10270 | Not Available | Negative | 2485564 - 2487609 | 74104.0 |
| nucleoside-diphosphate sugar epimerase/dehydratase | Verru16B_RS19010 | Not Available | Positive | 2487798 - 2489810 | 72852.4 |
| abc transporter permease | Verru16B_RS10280 | Not Available | Negative | 2489878 - 2490693 | 29708.5 |
| tolc family protein | Verru16B_RS10285 | Not Available | Positive | 2490882 - 2492174 | 48075.1 |
| efflux rnd transporter periplasmic adaptor subunit | Verru16B_RS10290 | Not Available | Positive | 2492171 - 2493310 | 41280.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
