Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | Verru16B_RS10195 | Not Available | Positive | 2470521 - 2471804 | 44620.6 |
| o-antigen ligase family protein | Verru16B_RS10200 | Not Available | Positive | 2471806 - 2472963 | 42789.3 |
| hypothetical protein | Verru16B_RS10205 | Not Available | Positive | 2472956 - 2474401 | 52937.4 |
| daph/dapd/glmu-related protein | Verru16B_RS10210 | Not Available | Positive | 2474398 - 2474964 | 20609.2 |
| polysaccharide biosynthesis protein | Verru16B_RS10215 | Not Available | Positive | 2475052 - 2476080 | 37692.3 |
| nad-dependent epimerase/dehydratase family protein | Verru16B_RS10220 | Not Available | Positive | 2476097 - 2477230 | 41666.9 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | Verru16B_RS10225 | Not Available | Positive | 2477236 - 2478354 | 41763.4 |
| hypothetical protein | Verru16B_RS10230 | Not Available | Positive | 2478351 - 2478791 | 16027.0 |
| glycosyltransferase family 4 protein | Verru16B_RS10235 | Not Available | Positive | 2478859 - 2480097 | 44887.7 |
| hypothetical protein | Verru16B_RS10240 | Not Available | Positive | 2480115 - 2481140 | 36430.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
