Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | Verru16B_RS09845 | Not Available | Positive | 2361005 - 2361838 | 29799.7 |
| glycosyltransferase | Verru16B_RS09850 | Not Available | Positive | 2361891 - 2363129 | 47189.7 |
| glycoside hydrolase family 43 protein | Verru16B_RS09855 | Not Available | Negative | 2363250 - 2364908 | 62157.2 |
| 3-isopropylmalate dehydratase small subunit | Verru16B_RS09860 | Not Available | Negative | 2365074 - 2365679 | 21469.7 |
| 3-isopropylmalate dehydratase large subunit | Verru16B_RS09865 | Not Available | Negative | 2365781 - 2367193 | 50117.2 |
| lysr family transcriptional regulator | Verru16B_RS19125 | Not Available | Positive | 2367376 - 2368287 | 32699.7 |
| glycosyltransferase | Verru16B_RS09875 | Not Available | Positive | 2368468 - 2369679 | 45157.5 |
| glycosyltransferase | Verru16B_RS09880 | Not Available | Positive | 2369808 - 2370869 | 39709.8 |
| pyridoxal phosphate-dependent aminotransferase family protein | Verru16B_RS09885 | Not Available | Negative | 2370901 - 2372097 | 43403.4 |
| glycosyltransferase | Verru16B_RS09890 | Not Available | Negative | 2372185 - 2373375 | 42374.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
