Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | Verru16B_RS09795 | Not Available | Positive | 2350291 - 2352084 | 64115.0 |
| log family protein | Verru16B_RS09800 | Not Available | Negative | 2352110 - 2354020 | 71514.0 |
| hypothetical protein | Verru16B_RS18595 | Not Available | Negative | 2354188 - 2354439 | 8242.45 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | Verru16B_RS09810 | Not Available | Positive | 2354414 - 2355082 | 23653.7 |
| shikimate kinase | Verru16B_RS09815 | Not Available | Positive | 2355210 - 2355737 | 19644.0 |
| trna epoxyqueuosine(34) reductase queg | Verru16B_RS09820 | Not Available | Positive | 2355734 - 2356915 | 41905.4 |
| thioesterase family protein | Verru16B_RS09825 | Not Available | Negative | 2356923 - 2357327 | 15533.9 |
| glycosyltransferase family 4 protein | Verru16B_RS09830 | Not Available | Negative | 2357324 - 2358511 | 42623.7 |
| phosphopantetheine-binding protein | Verru16B_RS09835 | Not Available | Positive | 2358872 - 2359648 | 28252.5 |
| beta-ketoacyl synthase | Verru16B_RS09840 | Not Available | Positive | 2359740 - 2360999 | 44334.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
