Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloregulator arsr/smtb family transcription factor | Verru16B_RS09745 | Not Available | Negative | 2336556 - 2337494 | 34569.8 |
| grea/greb family elongation factor | Verru16B_RS09750 | Not Available | Negative | 2337644 - 2339491 | 68566.2 |
| rsmb/nop family class i sam-dependent rna methyltransferase | Verru16B_RS09755 | Not Available | Positive | 2339602 - 2340846 | 45195.5 |
| aspartyl protease family protein | Verru16B_RS09760 | Not Available | Negative | 2340934 - 2342163 | 45184.5 |
| mfs transporter | Verru16B_RS09765 | Not Available | Negative | 2342172 - 2343521 | 47204.4 |
| chase domain-containing protein | Verru16B_RS09770 | Not Available | Negative | 2343585 - 2346194 | 95163.4 |
| serine hydroxymethyltransferase | Verru16B_RS09775 | Not Available | Negative | 2346275 - 2347564 | 45702.1 |
| protein tyrosine phosphatase | Verru16B_RS09780 | Not Available | Negative | 2347640 - 2348125 | 17479.5 |
| hypothetical protein | Verru16B_RS09785 | Not Available | Negative | 2348263 - 2348889 | 21480.8 |
| phosphoribosylamine--glycine ligase | Verru16B_RS09790 | Not Available | Negative | 2348886 - 2350175 | 44939.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
