Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter substrate-binding protein | Verru16B_RS09695 | Not Available | Negative | 2323326 - 2324939 | 61102.2 |
| abc transporter substrate-binding protein | Verru16B_RS17830 | Not Available | Negative | 2325008 - 2328223 | 115500.0 |
| peptide abc transporter substrate-binding protein | Verru16B_RS09705 | Not Available | Negative | 2328204 - 2329775 | 57776.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | Verru16B_RS09710 | Not Available | Negative | 2329863 - 2330342 | 16647.2 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | Verru16B_RS09715 | Not Available | Negative | 2330385 - 2331065 | 24565.8 |
| orotidine-5'-phosphate decarboxylase | Verru16B_RS09720 | Not Available | Negative | 2331120 - 2331818 | 24295.8 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | Verru16B_RS09725 | Not Available | Positive | 2331923 - 2332813 | 31079.4 |
| phosphoenolpyruvate--protein phosphotransferase | Verru16B_RS09730 | Not Available | Positive | 2332866 - 2334629 | 64326.8 |
| transglutaminase family protein | Verru16B_RS09735 | Not Available | Positive | 2334727 - 2335638 | 34142.2 |
| hypothetical protein | Verru16B_RS09740 | Not Available | Negative | 2335918 - 2336385 | 17443.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
