Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 28-related protein | Verru16B_RS09500 | Not Available | Positive | 2279520 - 2281328 | 63393.4 |
| laci family dna-binding transcriptional regulator | Verru16B_RS09505 | Not Available | Positive | 2281510 - 2282586 | 38857.7 |
| atp-binding cassette domain-containing protein | Verru16B_RS09510 | Not Available | Negative | 2282727 - 2283755 | 37793.9 |
| glycosyltransferase | Verru16B_RS09515 | Not Available | Positive | 2284014 - 2284937 | 35384.8 |
| fkbm family methyltransferase | Verru16B_RS09520 | Not Available | Positive | 2285011 - 2285823 | 29162.0 |
| 3-deoxy-d-manno-octulosonic acid kinase | Verru16B_RS09525 | Not Available | Positive | 2285855 - 2286568 | 26685.0 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | Verru16B_RS09530 | Not Available | Positive | 2286622 - 2287398 | 27949.1 |
| permease | Verru16B_RS09535 | Not Available | Positive | 2287395 - 2289002 | 55792.3 |
| amidohydrolase family protein | Verru16B_RS09540 | Not Available | Positive | 2289008 - 2290360 | 48481.1 |
| adenosine deaminase | Verru16B_RS09545 | Not Available | Positive | 2290368 - 2291363 | 36231.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
