Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS09305 | Not Available | Negative | 2229704 - 2230198 | 17811.3 |
| peptide abc transporter substrate-binding protein | Verru16B_RS09310 | Not Available | Negative | 2230262 - 2231878 | 58922.2 |
| yfbk domain-containing protein | Verru16B_RS19165 | Not Available | Positive | 2231976 - 2234615 | 91580.3 |
| rna polymerase sigma factor | Verru16B_RS09320 | Not Available | Positive | 2234785 - 2235324 | 20252.2 |
| von willebrand factor type a domain-containing protein | Verru16B_RS09325 | Not Available | Positive | 2235376 - 2237610 | 78306.8 |
| pep-cterm sorting domain-containing protein | Verru16B_RS09330 | Not Available | Negative | 2237724 - 2241038 | 115123.0 |
| pep-cterm sorting domain-containing protein | Verru16B_RS09335 | Not Available | Negative | 2241174 - 2244536 | 114873.0 |
| yhch/yjgk/yial family protein | Verru16B_RS09340 | Not Available | Positive | 2244689 - 2245180 | 18140.8 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | Verru16B_RS09345 | Not Available | Positive | 2245354 - 2246235 | 32609.5 |
| hypothetical protein | Verru16B_RS09350 | Not Available | Negative | 2246279 - 2246485 | 7762.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
