Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | Verru16B_RS09155 | Not Available | Positive | 2190908 - 2191258 | 12887.7 |
| atp-dependent chaperone clpb | Verru16B_RS09160 | Not Available | Positive | 2191447 - 2194032 | 95837.0 |
| transporter substrate-binding domain-containing protein | Verru16B_RS09165 | Not Available | Positive | 2194133 - 2196508 | 86332.2 |
| phosphatidylserine decarboxylase | Verru16B_RS09170 | Not Available | Positive | 2196588 - 2197487 | 33454.5 |
| amidase | Verru16B_RS09175 | Not Available | Positive | 2197584 - 2199143 | 53681.1 |
| Trna-leu | Not Available | Not Available | Positive | 2199193 - 2199273 | Not Available |
| dihydroorotate dehydrogenase-like protein | Verru16B_RS09185 | Not Available | Positive | 2199505 - 2200500 | 36722.2 |
| glycoside hydrolase family 5 protein | Verru16B_RS09190 | Not Available | Negative | 2200696 - 2201829 | 42595.5 |
| hypothetical protein | Verru16B_RS09195 | Not Available | Negative | 2201826 - 2203721 | 69990.1 |
| sodium:solute symporter family transporter | Verru16B_RS09200 | Not Available | Negative | 2203718 - 2205466 | 63060.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
