Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ychj family protein | Verru16B_RS08955 | Not Available | Negative | 2143953 - 2144444 | 17816.0 |
| crtac1 family protein | Verru16B_RS08960 | Not Available | Negative | 2144575 - 2146287 | 59929.5 |
| sensor histidine kinase | Verru16B_RS08965 | Not Available | Positive | 2146358 - 2147440 | 40617.7 |
| lyttr family dna-binding domain-containing protein | Verru16B_RS08970 | Not Available | Positive | 2147486 - 2148217 | 27039.9 |
| tonb-dependent siderophore receptor | Verru16B_RS08975 | Not Available | Positive | 2148314 - 2150296 | 72748.3 |
| yfir family protein | Verru16B_RS08980 | Not Available | Positive | 2150378 - 2150956 | 20203.6 |
| pas domain s-box protein | Verru16B_RS08985 | Not Available | Positive | 2150953 - 2153751 | 101730.0 |
| hypothetical protein | Verru16B_RS08990 | Not Available | Positive | 2153878 - 2154708 | 30838.6 |
| transporter | Verru16B_RS08995 | Not Available | Negative | 2154780 - 2155832 | 38288.1 |
| vanadium-dependent haloperoxidase | Verru16B_RS09000 | Not Available | Positive | 2156243 - 2157508 | 46151.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
