Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine-6-phosphate deaminase | Verru16B_RS08905 | Not Available | Positive | 2134200 - 2134985 | 29304.2 |
| Trna-gln | Not Available | Not Available | Positive | 2135130 - 2135203 | Not Available |
| giy-yig nuclease family protein | Verru16B_RS08915 | Not Available | Positive | 2135363 - 2135713 | 13123.9 |
| pas domain s-box protein | Verru16B_RS17825 | Not Available | Positive | 2135897 - 2137549 | 60492.5 |
| bon domain-containing protein | Verru16B_RS08925 | Not Available | Positive | 2137784 - 2138527 | 25752.4 |
| smp-30/gluconolactonase/lre family protein | Verru16B_RS08930 | Not Available | Positive | 2138698 - 2139576 | 31128.0 |
| glycoside hydrolase family 26 protein | Verru16B_RS08935 | Not Available | Positive | 2139627 - 2140676 | 39648.2 |
| hypothetical protein | Verru16B_RS08940 | Not Available | Negative | 2140669 - 2141139 | 16547.8 |
| age family epimerase/isomerase | Verru16B_RS08945 | Not Available | Positive | 2141293 - 2142507 | 44707.2 |
| glycosidase | Verru16B_RS08950 | Not Available | Positive | 2142618 - 2143838 | 45650.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
