Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf7010 family protein | Verru16B_RS08850 | Not Available | Negative | 2120612 - 2121169 | 19699.7 |
| atp-dependent helicase | Verru16B_RS08855 | Not Available | Negative | 2121233 - 2123245 | 75204.6 |
| duf4139 domain-containing protein | Verru16B_RS08860 | Not Available | Positive | 2123457 - 2124977 | 57429.1 |
| rep-associated tyrosine transposase | Verru16B_RS08865 | Not Available | Negative | 2125097 - 2125564 | 18281.8 |
| hypothetical protein | Verru16B_RS08870 | Not Available | Positive | 2125757 - 2127343 | 57062.1 |
| agenet domain-containing protein | Verru16B_RS08875 | Not Available | Positive | 2127527 - 2128840 | 47274.0 |
| ribosome recycling factor | Verru16B_RS08880 | Not Available | Negative | 2128994 - 2129551 | 20599.0 |
| ump kinase | Verru16B_RS08885 | Not Available | Negative | 2129610 - 2130341 | 26564.7 |
| glycoside hydrolase family 9 protein | Verru16B_RS08895 | Not Available | Positive | 2130762 - 2132477 | 62712.9 |
| glycoside hydrolase family 9 protein | Verru16B_RS08900 | Not Available | Positive | 2132474 - 2134168 | 61243.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
