Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly atpase sufc | Verru16B_RS08700 | Not Available | Negative | 2094512 - 2095279 | 27751.5 |
| fur family transcriptional regulator | Verru16B_RS08705 | Not Available | Negative | 2095314 - 2095748 | 15901.9 |
| methyl-accepting chemotaxis protein | Verru16B_RS08710 | Not Available | Negative | 2096230 - 2098092 | 65674.0 |
| hypothetical protein | Verru16B_RS08715 | Not Available | Negative | 2098141 - 2098695 | 20525.5 |
| carbohydrate porin | Verru16B_RS08720 | Not Available | Negative | 2098737 - 2099954 | 42841.6 |
| d-alanyl-d-alanine carboxypeptidase family protein | Verru16B_RS08725 | Not Available | Negative | 2100006 - 2100572 | 21005.4 |
| 2-hydroxyacid dehydrogenase | Verru16B_RS08730 | Not Available | Negative | 2100556 - 2101545 | 35097.2 |
| thioredoxin-disulfide reductase | Verru16B_RS08735 | Not Available | Negative | 2101560 - 2102504 | 33152.6 |
| hypothetical protein | Verru16B_RS08740 | Not Available | Positive | 2102648 - 2103784 | 41262.6 |
| ygiq family radical sam protein | Verru16B_RS08745 | Not Available | Positive | 2103842 - 2105911 | 77430.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
