Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | Verru16B_RS08600 | Not Available | Positive | 2073547 - 2074473 | 32213.8 |
| s8 family serine peptidase | Verru16B_RS08605 | Not Available | Positive | 2074476 - 2076344 | 66107.4 |
| iron-sulfur cluster assembly accessory protein | Verru16B_RS08610 | Not Available | Positive | 2076391 - 2076804 | 14063.0 |
| translation initiation factor if-3 | Verru16B_RS08615 | Not Available | Positive | 2076895 - 2077548 | 24214.2 |
| n-acetylmuramoyl-l-alanine amidase | Verru16B_RS08620 | Not Available | Positive | 2077703 - 2078710 | 36679.5 |
| hypothetical protein | Verru16B_RS08625 | Not Available | Positive | 2078715 - 2079776 | 38848.1 |
| fluoride efflux transporter crcb | Verru16B_RS08630 | Not Available | Positive | 2079773 - 2080144 | 13132.3 |
| tigr03790 family protein | Verru16B_RS08635 | Not Available | Positive | 2080164 - 2081873 | 61446.6 |
| clpp family protease | Verru16B_RS08640 | Not Available | Negative | 2081976 - 2082626 | 23602.3 |
| adenine deaminase | Verru16B_RS08645 | Not Available | Positive | 2082720 - 2084423 | 60902.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
