Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | Verru16B_RS08400 | Not Available | Positive | 2032778 - 2033656 | 32317.9 |
| 6-carboxytetrahydropterin synthase | Verru16B_RS08405 | Not Available | Negative | 2033672 - 2034127 | 17357.5 |
| oxygen-independent coproporphyrinogen iii oxidase | Verru16B_RS08410 | Not Available | Negative | 2034142 - 2035542 | 52234.1 |
| acyltransferase | Verru16B_RS08415 | Not Available | Positive | 2035680 - 2036816 | 42425.6 |
| aminotransferase class v-fold plp-dependent enzyme | Verru16B_RS08420 | Not Available | Negative | 2036831 - 2038102 | 45500.3 |
| fe-s cluster assembly sulfur transfer protein sufu | Verru16B_RS08425 | Not Available | Negative | 2038111 - 2038566 | 16219.1 |
| Trna-ser | Not Available | Not Available | Positive | 2038747 - 2038834 | Not Available |
| nadh-quinone oxidoreductase subunit nuob | Verru16B_RS08435 | Not Available | Positive | 2038990 - 2039499 | 18534.9 |
| nadh-quinone oxidoreductase subunit c | Verru16B_RS08440 | Not Available | Positive | 2039496 - 2040116 | 22755.9 |
| nadh dehydrogenase (quinone) subunit d | Verru16B_RS08445 | Not Available | Positive | 2040119 - 2041357 | 45795.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
