Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS08350 | Not Available | Positive | 2022946 - 2023581 | 23260.8 |
| hypothetical protein | Verru16B_RS08355 | Not Available | Positive | 2023583 - 2024152 | 20301.5 |
| hypothetical protein | Verru16B_RS08360 | Not Available | Positive | 2024149 - 2024652 | 17791.6 |
| type ii secretion system protein gspd | Verru16B_RS08365 | Not Available | Positive | 2024664 - 2026463 | 62229.1 |
| cpbp family intramembrane glutamic endopeptidase | Verru16B_RS08370 | Not Available | Negative | 2026637 - 2027251 | 22042.3 |
| polyprenyl synthetase family protein | Verru16B_RS08375 | Not Available | Positive | 2027446 - 2028384 | 33726.8 |
| sigma-70 family rna polymerase sigma factor | Verru16B_RS08380 | Not Available | Positive | 2028433 - 2029065 | 24067.7 |
| hypothetical protein | Verru16B_RS08385 | Not Available | Positive | 2029073 - 2029855 | 28837.3 |
| fumarate hydratase | Verru16B_RS08390 | Not Available | Negative | 2029991 - 2031631 | 59365.5 |
| sis domain-containing protein | Verru16B_RS08395 | Not Available | Negative | 2031713 - 2032705 | 34225.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
