Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease y | Verru16B_RS08255 | Not Available | Positive | 1997138 - 1998721 | 58909.1 |
| preq(1) synthase | Verru16B_RS08260 | Not Available | Positive | 1998819 - 1999172 | 13362.1 |
| histidinol-phosphatase | Verru16B_RS08265 | Not Available | Negative | 1999297 - 2000064 | 27392.9 |
| 3'-5' exonuclease | Verru16B_RS08270 | Not Available | Positive | 2000160 - 2000825 | 24822.6 |
| wecb/taga/cpsf family glycosyltransferase | Verru16B_RS08275 | Not Available | Negative | 2000884 - 2001675 | 28866.0 |
| mfs transporter | Verru16B_RS08280 | Not Available | Negative | 2001722 - 2002933 | 43004.3 |
| magnesium/cobalt transporter cora | Verru16B_RS08285 | Not Available | Negative | 2003081 - 2004052 | 37110.9 |
| s46 family peptidase | Verru16B_RS08290 | Not Available | Positive | 2004177 - 2006246 | 76414.8 |
| pts sugar transporter subunit iia | Verru16B_RS08295 | Not Available | Negative | 2006389 - 2006868 | 17342.1 |
| atp-binding protein | Verru16B_RS08300 | Not Available | Negative | 2006943 - 2008391 | 52492.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
