Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rne/rng family ribonuclease | Verru16B_RS08205 | Not Available | Negative | 1983896 - 1985638 | 66097.5 |
| rod shape-determining protein roda | Verru16B_RS08210 | Not Available | Negative | 1985746 - 1986972 | 44873.8 |
| o-antigen ligase | Verru16B_RS08215 | Not Available | Negative | 1987064 - 1988515 | 52334.6 |
| glycosyltransferase | Verru16B_RS08220 | Not Available | Positive | 1988630 - 1989616 | 36143.1 |
| glycosyltransferase | Verru16B_RS08225 | Not Available | Positive | 1989621 - 1990598 | 35436.0 |
| hypothetical protein | Verru16B_RS08230 | Not Available | Negative | 1990540 - 1991841 | 44613.9 |
| glycosyltransferase family 4 protein | Verru16B_RS08235 | Not Available | Positive | 1991952 - 1993049 | 39262.2 |
| glycosyltransferase family 4 protein | Verru16B_RS18120 | Not Available | Positive | 1993046 - 1994221 | 42032.7 |
| glycosyltransferase | Verru16B_RS19220 | Not Available | Negative | 1994218 - 1994751 | 19533.5 |
| exosortase/archaeosortase family protein | Verru16B_RS08250 | Not Available | Positive | 1995367 - 1997076 | 61132.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
